Bootstrap

Introduction to Bootstrapping

Bootstrapping is a distribution-free approach that serves as an alternative to normal and t-distribution methods for statistical inference. Bootstrapping addresses a core challenge:

"How to construct confidence intervals for non-mean/proportion statistics where CLT doesn't apply?"

Fundamental Concept

Bootstrapping uses the original sample as a population proxy to create multiple resamples. The process follows:

Step Description
1. Original Sample Use sample as proxy population
2. Resampling Create bootstrap samples with replacement
3. Sample Size Maintain original n in each resample
4. Distribution Build bootstrap distribution from resampled statistics

Advantages of Bootstrapping

Advantage Description
Distribution-free No normality assumption required
Versatility Works with various statistics beyond means and proportions
Flexibility Handles medians, standard deviations, IQR
Minimal Assumptions Requires fewer theoretical assumptions

Implementation Process

  1. Create multiple bootstrap samples (typically n1,000 resamples)
  2. Calculate the statistic of interest (θ) for each resample
  3. Aggregate results into a distribution plot
  4. Observe the emergent distribution shape (often normal-like)
  5. Identify the central peak around the original sample statistic (θ^)

Confidence Interval Derivation

Percentile Method

Confidence Level Lower Bound Upper Bound
95% CI 2.5th percentile 97.5th percentile
90% CI 5th percentile 95th percentile
99% CI 0.5th percentile 99.5th percentile

General Formula

For confidence level (1α):

Critical Implementation Requirements

1. Data Requirements

Requirement Specification
Sampling Random selection required
Sample Size n30 recommended

2. Resampling Protocol

3. Common Errors to Avoid

Error Why It's Problematic
No Replacement Violates bootstrap principle
Changed Sample Size Affects distribution properties
Modified Data Introduces bias

Comparison to Traditional Methods

Aspect Traditional CI Bootstrap CI
Theoretical Basis CLT/Normal Theory Empirical Resampling
Data Requirements Large n Moderate n
Computational Load Low High
Flexibility Limited High
Assumptions More strict More flexible

R Implementation Example

bootstrap <- function(x, statistic, n = 1000L) {
  bs <- replicate(n, {
    sb <- sample(x, replace = TRUE)
    statistic(sb)
  })
  data.frame(Sample = seq_len(n), Statistic = bs)
}

Function Components

Component Purpose
x Input data vector
statistic Function to compute desired statistic
n Number of bootstrap resamples
replace = TRUE Ensures proper bootstrap sampling

Validation Process

Distribution Checking

  1. Verify bootstrap distribution shape
  2. Check symmetry properties:
    • Symmetric: Standard error methods may be applicable
    • Asymmetric: Prefer percentile method

Quality Metrics

Metric Target
Number of Resamples 1,000
Coverage Probability Close to nominal level
Distribution Shape Smooth, well-defined